WashU Pan-Cancer miRNome Atlas


Search by miRNA
  Tumor Development
  Tumor Stage and Grade
  • Survival Outcome
  • Expression Profile
Search by Cancer Type
  Tumor Development
  Tumor Stage and Grade
  Survival Outcome
  • Expression Profile
Search for miRNA-Target Correlation
  Search by miRNA
  Search by Gene
Survival Signature Analysis
  Pre-calculated signatures
  Custom signatures
Clustering Analysis
  Hierarchical clustering
  K-means clustering
Search gene target for potential miRNA.
Input gene using gene name or NCBI accession:
Example submission
Select a cancer type     Select all cancers
Select a significance threshold:
P <  
Select a miRDB score threshold (0-100):
Score >  

Search by a gene name or gene accession to retrieve a list of potential targeting miRNAs.

Gene targets are selected by correlation p-value and ranked by correlation.

Pearson's correlation was calculated in paired tumor/normal samples to evaluate the relationship between miRNA expression and gene expression.
Correlation values range between -1 and 1, with negative values indicating a negative relationship, as expected between miRNAs and gene targets.
Prediction scores from miRDB are also provided to indicate the likelihood of a true miRNA-target interaction (score > 50), as opposed to a coincidental negative relationship between a miRNA and a potential gene target.

The limits on significance can be increased or decreased to expand or contract results, respectively.